Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKRALSLLLALCLCLSLMPAASASVVESTVQVGPYTFEIWFDGTATLTRYDESLAGSTYADIPASVTDENGQEYPVTV--IGEKAFEE-TNITGVTVPDSVISIGRLAFAYCNSLSDVKLSENLIYINELAFASCDALKEITIPASVEKM-DNPFRWSNALDTVYMEGMVAPE
4FS7 Chain:A ((79-167))
---------------------------------------------------------------------------PSTVREIGEFAFENCSKLEIINIPDSVKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCD-FKEITIPEGVTVIGDEAFATCESLEYV---------
General information:
TITO was launched using:
RESULT:
Template:
4FS7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70591 for 578 contacts (-122.1/contact) +
2D Compatibility (PS) -8614 + (NN) 1650 + (LL) 6360
1D Compatibility (HY) -7600 + (ID) 1850
Total energy: -80645.0 ( -139.52 by residue)
QMean score : 0.228
(partial model without unconserved sides chains):
PDB file :
Tito_4FS7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FS7-query.scw
PDB file :
Tito_Scwrl_4FS7.pdb
: