Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNSRRDFLKKGALAGFSALMIPEIAKAAVKENTSVHAPKINLKKDCVILFQGDSITDCGRDRNSNRCNTMEQFGSGYVLFTATQLLEGKAALQPKIYNRGISGNKVYQLRERWEIDCLAFQPDVLSILIGVNDYWHTL-------THGYKGTVETYENDLRALLKYTKEKLPNTQIVLCEPFTLRDGAAIEDSKWYPM---FDEFRKSARKLSEEFNTIFVPFQSGFDAAVK-LAPARYWSNDGVHPDLPGRQLMANMWMEATGLK |
4JKO Chain:A ((9-214)) | ------------------------------------------------LLFIGDAITDCGRARPEGE-GSFGALGTGYVAYVVGLLQAVYPELGIRVVNKGISGNTVRDLKARWEEDVIAQKPDWVSIMIGINDVWRQYDLPFMKEKHVY---LDEYEATLRSLVLETKPLVKG--IILMTPFY------IEGNEQDPMRRTMDQYGRVVKQIAEETNSLFVDTQAAFNEVLKTLYPAAL-AWDRVHPSVAGHMILARAFLREIGFE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JKO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109152 for 1628 contacts (-67.0/contact) +
2D Compatibility (PS) -21380 + (NN) -9937 + (LL) 4196
1D Compatibility (HY) -19600 + (ID) 3750
Total energy: -159623.0 ( -98.05 by residue)
QMean score : 0.356
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