Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALSLCVLFTLASVVSGHVAHPSLGRGDGFPFLWDNAASTLDQLNGTDTTIILNGFNYLDRLSMFKTVLEGTRKYFDSFAPNN---TANIYWGFTIYLNWILATGRSADP-----TGHTTCGL---AHGDPMCLAEESWWNCI-KYNPAAIAFFAAKKAGIFGDVTKTIVLAKPKEANSPYCSSEEECQAAYPDVMATYLDYFEYLMSLEKTGESIDMDKAQQLLWKAHVTSMENSIAVCKPRLKNYNIIERQLDRDYLISLLYFAATNFPTNFIESIKFVADMPHRQLRFGDIAPFIPDMDMKKNNLLVVLHGFYTVHSLSGGSSLTHWRNLMESPVSREMARDMVNLILAGTPVEVQVELAKLGIPTPVDYKDDDK |
| 1VLJ Chain:A ((233-336)) | ----------------------------------------------------------------IRTIMKMTERLIEK--PDDYEARANLAWSATIALNGTMAVGRRGGEWACHRIEHSLSALYDIAHGAGLAIVFPAWMKYVYRKNPAQFERFAKKIFGFEGEGEELIL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VLJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9027 for 465 contacts (-19.4/contact) +
2D Compatibility (PS) -9053 + (NN) -969 + (LL) 18404
1D Compatibility (HY) -4400 + (ID) 1400
Total energy: -6445.0 ( -13.86 by residue)
QMean score : -0.010
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