Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------MEELSGKPLSYAEKEKLKEKLAFLKKEYSRTLARLQRAKRAEKAK-----NSKKAIEDGVPQ---------------PEALEHHHHHH
2K5R Chain:A ((1-97))
MDRKLLHLLCSPDTRQPLSLLESKGLEALNKAIVSGTVQRADGSIQNQSLHEALITRDRKQVFRIEDSIPVLLPEEAIATIQIANFPDKLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2K5R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 33763 for 327 contacts (103.3/contact) +
2D Compatibility (PS) -6921 + (NN) 1770 + (LL) 0
1D Compatibility (HY) -800 + (ID) 950
Total energy: 26862.0 ( 82.15 by residue)
QMean score : 0.170
(partial model without unconserved sides chains):
PDB file :
Tito_2K5R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K5R-query.scw
PDB file :
Tito_Scwrl_2K5R.pdb
: