Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GRIPSPPSKTSLDIAEELQNDKGVSFAFQAREEELGAFTKRTLFAYSGDGLTGPFKAPASAELSSFLTAHPKGRWLIAFPLGTGIVSVDEGILTLEISRSLPEVGSGSSFYLTEK
2BKU Chain:B ((514-574))
---------------------------FNARASAFSALT--TMVEYATDTV-----AETSASISTFVMDK----------LGQ-TMSVDENQLTLEDAQSLQELQS---------
General information:
TITO was launched using:
RESULT:
Template:
2BKU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16086 for 287 contacts (-56.0/contact) +
2D Compatibility (PS) -6626 + (NN) -592 + (LL) 1716
1D Compatibility (HY) -5600 + (ID) 1350
Total energy: -28538.0 ( -99.44 by residue)
QMean score : 0.101
(partial model without unconserved sides chains):
PDB file :
Tito_2BKU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BKU-query.scw
PDB file :
Tito_Scwrl_2BKU.pdb
: