Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDATPNAVELTVDNAWFIAETIGAGTFPWVLAITMPYSDAAQRGAFVDRQRDELTRMGLLSPQGVINPAVADWIKVVCFPDRWLDLRYVGPASADGACELLRGIVALRTGTGKTSNKTGNGVVALRNAQLVTFTAMDIDDPRALVPILGVGLAHRPPARFDEFSLPTRVGARADERLRSGVPLGEVVDYLGIPASARPVVESVFSGPRSYVEIVAGCNRDGRHTTTEVGLSIVDTSAGRVLVSPSRAFDGEWVST--FSPGTPFAIAVAIQTLTACLPDGQWFPGQRVSRDFSTQSS |
| 1CIV Chain:A ((273-328)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GRSSAASTAVSIVD--AIRSLVTPTP--EGDWFSTGVYTNGNPYGIAEDIVFSMPCRSKG----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CIV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3912 for 243 contacts (-16.1/contact) +
2D Compatibility (PS) -5892 + (NN) -2601 + (LL) 14300
1D Compatibility (HY) -2800 + (ID) 1100
Total energy: -2005.0 ( -8.25 by residue)
QMean score : -0.003
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