Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | CSFGIENTAGGSAVFHNYTRGASNSVTKNNQLLGGYGSRPWLGSTYTEHSNAALHFLGAGDTSATNHGGWIRLLVTPKGKTISDRVPAFRLSDNGDLWLVPDGAMHSDLGLVRSIETLNAAVPRFNAPSIQDGRGLKIVAPQAPEIDLIAPRGSGASAPAIRAMWCDGSLADTTRYIGATQPGSTFYIGASGHDGEKFDSMRGSVAIKSAGGWGPTSTP-TQVVLETCESGSISRLPRWGVDH---NGTLMPMADNRYNLGWGSGRVKQVYAVNGTINTSDARLKNDVRAMSDPETEAAKAIAKEIGFWTWKEQADMNDIREHCGLTVQRAIEIMESFGL-----DPFKYGFICYDKWDE-------HTVVSEYGPANEDG----TENPIYKTI---PAGDHYSFRLEELNLFIAKG---------FEARLSAIEDKLGM |
| 3GW6 Chain:A ((49-274)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IIFCGGEGTSSTTGAQITLYGANNTDSRRIVYNGDEHLFQSADVKPYNDNVTALGGPSNRFTTAYLGSNPIVTANGERKTEPVVFDDAFLDAWGDVHYIMYQWLDAVQLKGNDARIHFGVIAQQIRDVFIAHGLMDENS--CRYAVLCYDKYPRMTDTVFSHNEIVEH--TDEEGNVTTTEEPVYTEVVIHEEGEEWGVRPD--GIFFAEAAYQRRKLERIEARLSALEQ---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GW6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25605 for 888 contacts (-28.8/contact) +
2D Compatibility (PS) -20808 + (NN) -6428 + (LL) 7928
1D Compatibility (HY) -6000 + (ID) 2900
Total energy: -53813.0 ( -60.60 by residue)
QMean score : 0.093
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