Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | SNINKAKVASVESDYSSIKSAALSYYSDTNK-IPVTPDG-QTGLNVLETYMESLPDKADIGGEYKLIKVGNKLVLQ---IGKDGEGVTLTEAQSAKLLSDIGKDKIYTGVTGDNFGEQLKDTTKIDNKALYIVLIDNTVMDSTK |
| 3MS1 Chain:C ((76-170)) | -----AKVAAIEYDPNRSARIALLHYVDGEKRYIIAPDGLQVGQQVV-----AGPDAP--------IQVGNALPLRFIPVGTVVHAVELEPKKGAKLARAAGTSAQIQGREGD------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MS1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 15430 for 486 contacts (31.7/contact) +
2D Compatibility (PS) -9172 + (NN) 395 + (LL) 2904
1D Compatibility (HY) -2800 + (ID) 1750
Total energy: 5007.0 ( 10.30 by residue)
QMean score : 0.067
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