Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEAALTPAFEEPEAPRASPRSRSTLLKRLADVVCLPSSRINAFERSMTADLLVEMLRDANVGEREKVARRLAMLNEMPGVLVRLLLRDELPVARALLVDSEKLSDADLISCLYQATTEHRRLIAQRRGVSEVVADALIEVGEPAVIETLLRNELVKLSHQGVENIVAATRDAQHLIPLLLRRAELRPSHAYVMFWWADSEARRVILQRFAVSREILQDAVGDVFALASAEGWQDPLSRKALQFIERRQRNRAAIAKSPFNSLDEAVAAGEGGFNREIAEEISYLSGLKPM---TGAKIFTD-------PGGEPLAILCKATGLPRGCVRQLWRGLRRQEVDRTGATDPNLERVLTVYDAIAVDRAQTVLRYWNWSLTSALTPALLKAIRDGDEAAVDEYSAPQRAAMLALSRDFGR |
4KWH Chain:A ((27-103)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GIGRAIAEKLGYAGALVAVHYATGADAAAEVAESIEKDGGRAFTVKAE-LGVP-GDVDVLFEGLERGLKERTGATDLDI------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KWH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4832 for 366 contacts (-13.2/contact) +
2D Compatibility (PS) -7566 + (NN) -3962 + (LL) 29828
1D Compatibility (HY) -2800 + (ID) 1300
Total energy: 9368.0 ( 25.60 by residue)
QMean score : 0.035
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