Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTSVWGKSILALVFTFMCSLAISAASPKDYLYDTKEENGKIISKVVFLQENGLLNKQVRYEFQYNENGKVSEKKAFRWDRTNDEWVPFYQITYQYDDQSGEIKTNYGMWDKKKKNFSLNVQNMIIPSTNYEEIFS
2LH9 Chain:A ((36-79))
--------------------------------------------------EADLVSKMLRAVLQSHKNGIVLPRLQGEYRSLTGDWIPFKQLGY------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2LH9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 14176 for 249 contacts (56.9/contact) +
2D Compatibility (PS) -4655 + (NN) -2254 + (LL) 6400
1D Compatibility (HY) -2800 + (ID) 650
Total energy: 10217.0 ( 41.03 by residue)
QMean score : 0.041
(partial model without unconserved sides chains):
PDB file :
Tito_2LH9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LH9-query.scw
PDB file :
Tito_Scwrl_2LH9.pdb
: