Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTGLLSNFRNTIIVSFVLALVIVIGYGHSPHGHDATYFQAIFRWLHVLFGILWIGLLYYFNFVQIRVMPQIPAELKPAVSKYIAPEALFWFRWAALATWVMGVLLAYNRGYLVEAFTLGLAGGYTPGVDMG--FTFIGTGMWLATVMFFNVWVFIWPNQKIALGIVEADADAKAKAAKTAMLVSRTNTLLSIPMLATMAMHQTLFG |
3F8J Chain:B ((46-71)) | ------------------------------------------------------------------------------------------------------------------AYSLVLAGGYEDDVDNGNYFTYTGSG------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F8J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5769 for 84 contacts (-68.7/contact) +
2D Compatibility (PS) -2774 + (NN) -2373 + (LL) 17532
1D Compatibility (HY) -2000 + (ID) 700
Total energy: 3916.0 ( 46.62 by residue)
QMean score : -0.029
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