Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | SNAMPFLPDPGEPSPLKVVIAGAGYVGTCLAVTLAGRGAEVVAVDSDPGTVADLRAGRCRLPEPGLAGAVRDLAATGRLTASTSYDPVGAADVVIVTVGTPTDAGHEMVTD--QLVAACEQIAPRLRAGQLVILKSTVSPGTTRTLVAPLLESGGLVHERDFGLAFCPERLAEGVALAQVRTLPVVVGGCGPRSAAAAERFWRSALGVDVRQVPSAESAEVVKLATNWWIDANVAIANELARYCAVLGVDVLDVIGAANTLPKGSSMVNLLLPGVGVGGSCLTKDPWMAWRDGRDRGVPLRTVETARAVNDDMPRHTAAVIADELVKLGRDRNDTTIAVLGAAFKNDTGDVRNTPVRGVVAAL-RDSGFRVRIFDPLADPAEIVARFGTAPAASLDEAVSGAGCLAFLAGHRQFHELD---FGALAERVDEPCLVFDGRMHLPPARIRELHRFGFAYRGIGR |
| 3OJO Chain:A ((13-407)) | ----------------KLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPE---ASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDIYLVHCPERVLPGKILEELVHNNRIIGGVTKACIEAGKRVYRTFVQGEMIET-DARTAEMSKLMENTYRDVNIALANELTKICNNLNINVLDVIEMANKHPR----VNIHQPGPGVGGHCLAVDP---------NA---KLIQTGREINNSMP----AYVVDTTKQIIKALSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVELDFV--------EHDMSHAVKDASLVLILSDHSEFKNLSDSHFDKMKHKV-----IFDTK----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OJO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -251622 for 3155 contacts (-79.8/contact) +
2D Compatibility (PS) -41689 + (NN) -20526 + (LL) 2764
1D Compatibility (HY) -28800 + (ID) 6000
Total energy: -345873.0 ( -109.63 by residue)
QMean score : 0.432
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