Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GFDPEKAQCCLVENGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTC-VGVSRWPVHDFNHRT----TSDMWLYRAYSGNLYHNG--EQTLTLSSFTQGD--FIT-----CVLDMEARTISFGKNGEEPKLAFEDVDAAELYPCVMFYSSNPGEKVKICDMQMR
3F2O Chain:A ((91-213))
-------------------------------VGYTRGLHVWQITWAMRQRGTHAVVGVATADAPLHSVGYTTLVGNNHESWGWDLGRNRLYHDGKNQPSKTYPAFLEPDETFIVPDSFLVALDMDDGTLSFIVDGQYMGVAFRGLKGKKLYPVV-------------------
General information:
TITO was launched using:
RESULT:
Template:
3F2O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56286 for 693 contacts (-81.2/contact) +
2D Compatibility (PS) -11945 + (NN) -4783 + (LL) 1892
1D Compatibility (HY) -7600 + (ID) 1650
Total energy: -80372.0 ( -115.98 by residue)
QMean score : 0.317
(partial model without unconserved sides chains):
PDB file :
Tito_3F2O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F2O-query.scw
PDB file :
Tito_Scwrl_3F2O.pdb
: