Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAEARVSRWYFGGLASCGAA-----CCTHPLDLLKVHLQT---QQEVKLRMTGMA---LRVVRTDGILALYSGLSASLCRQMTYSLTRFAIYETVRDRVAKGSQGPLPFHEKV------LLGSVSGLAGGFVGTPADLVNVRMQNDVKLPQGQRRN----YAHALDGLYRVAREEGLRRLFSGATMASSR---GALVTVGQLSCYDQAKQLVLSTGYLSDNIFTHFVASFIAGGCATFLCQPLDVLKTRLMNSKGEYQGVFHCAVETAKLGPLAFYKGLVPAGIRLIPHTVLTFVFLEQLRKNFGIKVPS |
| 1OKC Chain:A ((110-293)) | --------RYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDT--------AKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRM-----MMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLV----LYDEI------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OKC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44934 for 983 contacts (-45.7/contact) +
2D Compatibility (PS) -16278 + (NN) 14 + (LL) 9184
1D Compatibility (HY) -9600 + (ID) 2650
Total energy: -64264.0 ( -65.38 by residue)
QMean score : 0.182
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