Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHQDLSITAKLINGGVAGLVGVTCVFPIDLAKTRLQNQHG------KAMYKGMIDCLMKTARAEGFFGMYRGAAVNLTLVTPEKAIKLAANDFFRRLLM-----EDGMQRNLKMEMLAGCGAGMCQVVVTCPMEMLKIQL-QDAGRLAVHHQGSASAPSTSRSYT-TGSASTHRRPSATLIAWELLRTQGLAGLYRGLGATLLRDIPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSIAAVA---VTPLDVLKTR--IQTLKKGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPLFGIAQGVYFIGIGERILKCFD |
| 2C3E Chain:A ((1-278)) | -SDQALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQ-----------REFTGLGNCIT-----------KIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKG-----MLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKG-ADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEI----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C3E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77816 for 1820 contacts (-42.8/contact) +
2D Compatibility (PS) -26559 + (NN) 2507 + (LL) 2408
1D Compatibility (HY) -15200 + (ID) 4100
Total energy: -118760.0 ( -65.25 by residue)
QMean score : 0.180
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