Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDGNDNVTLLFAPLLRDNYTLAPNASSLGPGTDLALAPASSAGPGPGLSLGPGPSFGFSPGPTPTPEPTTSGLAGGAASHGPSPFPRPWAPHALPFWDTPLNHGLNVFVGAALCITMLGLGCTVDVNHFGAHVRRPVGALLAALCQFGLLPLLAFLLALAFKLDEVAAVAVLLCGCCPGGNLSNLMSLLVDGDMNLSIIMTISSTLLALVLMPLCLWIYSWAWINTPIVQLLPLGTVTLTLCSTLIPIGLGVFIRYKYS----RVADYIVKVSLWSLLVTLVVLFIMTGTMLGPE-LLASIPAAVYVIAIFMPLAGYASGYGLATLFHLPPNCKRTVCLETGSQNVQLCTAILKLAFPPQFIGSMYMFPLLYALFQSAEAGIFVLIYKMYGSEMLHKRDPLDEDEDTDISYKKLKEEEMADTSYGTVKAENIIMMETAQTSL |
| 4N7X Chain:A ((34-278)) | -------------------------------------------------------------------------------------------------------GIGPYVGPLLMLIMFAMGVTLRLDDFKRVLSRPAPVAAATFLHYLIMPLTAWILAMLFRMPPDLSAGMVLVGSVASGTASNVMIYLAKGDVALSVTISAVSTLVGVFATPLLTRLYVDATISVDVV-----GMLKSILQIVVIPITAGLVIHHTFTKTVKRIEPYLPAMSM------VCILAIISAVVAGSQSHIASVGFVVIIAVILHNGIGLLSGYWGGKLFGFDESTCRTLAIAVGMQNSGLAATLGKIYFSPLAALPGALFSVWHNLSGSLLAGYWSGKP------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4N7X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -271038 for 2014 contacts (-134.6/contact) +
2D Compatibility (PS) -25257 + (NN) -16636 + (LL) 5608
1D Compatibility (HY) -21600 + (ID) 3450
Total energy: -332373.0 ( -165.03 by residue)
QMean score : 0.230
|
|
|