Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSGPGIQAAIDLTAGAAGGTACVLTGQPFDTIKVKMQTFPDLYKGLTDCFLKTYAQVGLRGFYKGTGPALMAYVAENSVLF-------MCYGFCQQ--FVRKVAGMDKQAKLSDLQTAAAGSFASAFAALALCPTELVKCRLQTMYEMEMSGKIAKSHNTIWSVVKGILKKDGPLGFYHGLSSTLLQEVPGYFFFFGGYELSRSFFASGRSKDELGPVHLMLSGGVAGICL----WLVV-------FPVDCIKSRIQVLSMYG-KQAGFIGTLLSVVRNEGIVALYSGLKATMIRAIPANGALFVAYEYSRKMMMKQLEAY |
| 4C9J Chain:A ((35-306)) | -----GVSAAIAKTAASPIERVKILI-QNQDEM-IKQGTLDKKYSGIVDCFKRTAKQEGLISFWRGNTANVIRYFPTQALNFAFKDKIKLMFGFKKEEGYGKWFAG-----------NLASGGAAGALSLLFVYSLDFARTRLAADAKS------ARQFNGLTDVYKKTLKSDGIAGLYRGFMPSVVGIVVYRGLYFGMF-------------DSLK---------------FLLGWVVTTGASTCSYPLDTVRRRMMMTSGQAVKYNGAIDCLKKIVASEGVGSLFKGCGANILRSVAGAGVISMYDQLQMILFGKKF--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C9J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91382 for 1725 contacts (-53.0/contact) +
2D Compatibility (PS) -23952 + (NN) -835 + (LL) 3116
1D Compatibility (HY) -14800 + (ID) 3450
Total energy: -131303.0 ( -76.12 by residue)
QMean score : 0.171
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