Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSFDEALQRVGEFGRFQRRVFLLLCLTGVTFAFLFVGVVFLGTQPDHYWCRGPSAAALAERCGWSPEEEWNRTAPASRGPEPPERRGRCQRYLLEAANDSASATSALSCADPLAAFPNRSAPLVPCRGGWRYAQAHSTIVSEFDLVCVNAWMLDLTQAILNLGFLTGAFTLGYAADRYGR-------IVIYLLSCLG-----VGVTG------VVVAFAPNFPVFVIFRFLQGVFGKGTWMTCYVIVTEIVGSKQRRIVGIVIQMFFTLGIIILPGIAYFIP-----------NWQGIQLAITLPSFLFLLYYWVVPESPRWLITRKKGDKALQILRRIAKCNGKYLSSN-YSEITVT-DEEVSNPSFLDLVRTPQMRKCTLILMFAWFT--SAVVYQG--LVMRLGIIGGNLYIDFFISGVVELPGALLILLTIERLGRR--LPFAASNIVAGVACLVTAFLPEGIAWLRTTVATLGRLGITMAFE-----IVYLVNSELYPTTLR--------------NFGVSLCSGLCDFGG-IIAPFLLFRLAAVWLELPLIIFGILASICGGLVMLLPETKGIALPETVDDVEKLGSPHSCKCGRNKKTPVSRSHL |
| 4JA4 Chain:A ((66-479)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------IGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLM----QEQAEGILRKIM---GNTLATQAVQEIKHSLDHG--------MFGVGVIVIGVMLSIFQQFVGINVVLYYAPEV-----------LLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPG----IVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSW--------NGFSYWIYGCM---GVLAALF--MWKFVPETKG----KTLEELEALWE------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JA4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -231120 for 2257 contacts (-102.4/contact) +
2D Compatibility (PS) -33486 + (NN) -4345 + (LL) 14124
1D Compatibility (HY) -35200 + (ID) 4800
Total energy: -294827.0 ( -130.63 by residue)
QMean score : 0.124
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