Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFQDLLGHAGDLWRFQILQTVFLSIFAVATYLHFMLENFTAFIPGHRCWVHILDNDTVSDNDTGALSQDALLRISIPLDSNMRPEKCRRFVHPQWQLLHLNGTFPNTSDADMEPCVDGWVYDRISFSSTIVTEWDLVCDSQSLTSVAKFVFMAGMMVGGILGGHLSDRFGRRFVLRWCYLQVAIVGTCAA---------------------LAPTFLIYCSLRFLSGIAAMSLITNTIMLIAEWATHR-------FQAMGITLGM----CPSGIAFMTLAGLA--FAIRDWHILQLVVSVPYFVIFLTSSWLLESARWLIINNKPEEGLKELRKAAHRSGMKNARDTLTLEILKSTMKKELEAAQKKKPSLCEMLHMPNICKRISLLSFTRFA--NFMAYFGLNLHVQHLG--NNVFLLQTLFGAVILLANCV-APWALKYMNRRASQMLLMFLLAICL--LAIIFVPQEMQTLREVLATLGLGASALA-NTLAFAHGNEVIPTIIRARAMGINATFANIAGALA----PLM----MILSVYSPPLPWIIYGVFPFISG-FAFLLLPETRNKPLFDTIQDEKNERKDPREPKQEDPRVEVTQF |
| 4GBY Chain:A ((67-479)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------GCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIY---RIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVN--YFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKI-----MGNTLATQAVQ----EIKHSLDHGRKTGGRLL-MFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVF-KTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTL-----EELEALWE---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GBY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213576 for 2955 contacts (-72.3/contact) +
2D Compatibility (PS) -37658 + (NN) -16110 + (LL) 13460
1D Compatibility (HY) -31600 + (ID) 5000
Total energy: -290484.0 ( -98.30 by residue)
QMean score : 0.184
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