Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFSKLLEQAGGVGLFQTLQVLTFILPCLMIPSQMLLENFSAAIPGHRCWTHMLDNGSAVSTNMTPKALLTISIPPGPNQGPHQCRRFRQPQWQLLDPNATATSWSEADTEPCVDGWVYDRSVFTSTIVAKWDLVCSSQGLKPLSQSIFMS--------GILVGSFIWGLLSYRFGRKPMLSWCCLQLAVAGTSTI---------------------FAPTFVIYCGLRFVAAFGMAGIFLSSLTLMVEWTTTSRRAVTMTVVGCAFSAGQ----------AALGGLAFALRD-WRTLQLAASVPFFAISLISWWLPESARWLIIKGKPDQALQELRKVARINGHKEAKNLTIEVLMSSVKEEVASAKEPRSVLDLFCVPVL---RWRSCAMLVVNFSLLISYYGLVFDLQSLGRDIFLLQALF-GAVDFLGRATTALLLSFLGRRTIQ-AGSQAMA-GLAILANMLVPQDLQTLRVVFAVLGKGCFGISL--TCLTIYKAELFPTPVRMTADGIL--------HTVGRLGAMMGPLILMSRQALPLLPPLLYGVISIASSLVVLFFLPETQGLPLPDTIQDLESQKSTAAQGNRQEAVTVESTSL |
| 4GBZ Chain:A ((26-479)) | ----------------------------------------------------------------------------------------------------------------------YDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIY---RIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRK---IMGNTLATQAVQE-----IKHSLDHGRKTGGRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLL-SEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKG----KTLEELEALWE------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4GBZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -236163 for 3278 contacts (-72.0/contact) +
2D Compatibility (PS) -41498 + (NN) -13488 + (LL) 9608
1D Compatibility (HY) -29200 + (ID) 5000
Total energy: -315741.0 ( -96.32 by residue)
QMean score : 0.241
|
|
|