Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSRHFEGIYDHVGHFGRFQRVLYFICAFQNISCGIHYLASVFMGVTPHHVCRPPGNVSQVVFHNHSNWSLEDTGALLSSGQKDYVTVQLQNGEIWELSRCSRNKRENTSSLGYEYTGSKKEFPCVDGYIYDQNTWKSTAVTQWNLVCDRKWLAMLIQPLFMFGVLLGSVTFGYFSDRLGRRVVLWATSSSMFL-FGIAAAFAVDYYTFMAAR-----------FFLAMVASGYLVVGFVYVMEFIGMKSRTWASVHLHSFFAVGTLLVALTGYLVRTWW-LYQMILSTVTVPFILCCWVLPETPFWLLSEGRYEEAQKIVDIMAKWNRASSCKLSELLSLDLQGPVSNSPTEVQKHNLSYLFYNWSITKRTLTVWLIWFTGSLGFYSFSLN-SVNLG--------GNEYLNLFLLGVVEI--------PAYTFVCIAMDKVGRRTV-----LAYSLFCSALACGVVMVIPQKHYILGVVTAMVGKFAIGAAFGLIYLYTAELYPTIVRSLAVGSGSMVCRLASILAPFSVDL--------SSIWIFIPQLFVGTMALLSGVLTLKLPETLGKRLATTWEEAAKLESENESKSSKLLLTTNNSGLEKTEAITPRDSGLGE |
| 4J05 Chain:A ((130-506)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GNRVLTWITICRVFLGIGIGGDYPMSA-TVVSDRANIHRRGTLLCFIFANQGWGSFVGSLVTIVTISGFKHRL-KSGHTHDVDKAWRILIGLS--LIPAFGTLYQR--------------------------------------------------------------------WQEF-VAY-FSTWNHFRNLLGSMLGWFLVDIAFYGINLNQSVVLAQIGFAGKTGDVYDKLFQLATGNIIVTALGFLPGYYFTLFLIDIVGRKKLQFMGFIMSGLFLAILAGEIDHI--GKGPLLACFTFMQFFFNFGAN-TTTFIVAAELFPTRIRASAHGISAAAGKCGAILSSLVFNQLKAKIGTSAVLWIFFSTCILGFIS------TFLIDETMGVDPDEKDLEERRAR---------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4J05.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -218710 for 1910 contacts (-114.5/contact) +
2D Compatibility (PS) -26823 + (NN) -2075 + (LL) 19100
1D Compatibility (HY) -24400 + (ID) 4250
Total energy: -257158.0 ( -134.64 by residue)
QMean score : 0.011
|
|
|