Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASDPIFTLAPPLHCHYGAFPPNASGWEQPPNASGVSVASAALAASAASRVATSTDPSCSGFAPPDFNHCLKDWDYNGLPVLTTNAIGQWDLVCDLGWQVILEQILFILGFASGYLFLGYPADRFGRRGIVLLTLGLVGPCGVGGA---------AAGSSTGVMALRFLLGFLLAGVDLGVYLMRLELCDPTQRLRVA---LAGELVGVGGHFLFLGLALV-----------------SKDWRFLQRMITAPCILF--LFYGWPGLFLESARWLIVKRQIEEAQSVLRILAERNRPHGQMLGEEAQEALQDLENTCPLPATSSFSFASLLNYRNIWKNLLILG------------FTNFIAHAIRHCYQP--VGGGGSPSDFYLCSLLASGTAALACVFLGV-TVDRFGRRGILLLSMTLTGIASLVLLGLWDCEHPIFPTVWAQQGNPNRDLNEAAITTFSVLGLFSSQAAAILSTLLAAEVIPTTVRGRGLGLIMALGALGGLSGPAQRLHMGHGAFLQHVVLAACALLCILSIMLLPETKRKLLPEVLRDGELCRRPSLLRQPPPTRCDHVPLLATPNPAL |
| 4GBZ Chain:A ((76-342)) | ----------------------------------------------------------------------------------------------------------------------GYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVP----ESPRWLMSRGKQEQAEGILR------KIMGNTL---ATQAVQEIKH-------------SLDHGRKTGGRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWE------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4GBZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -87289 for 1391 contacts (-62.8/contact) +
2D Compatibility (PS) -22690 + (NN) -8160 + (LL) 10300
1D Compatibility (HY) -17600 + (ID) 3350
Total energy: -128789.0 ( -92.59 by residue)
QMean score : 0.096
|
|
|