Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMHFKSGLELTELQNMTVPEDDNISNDSNDFTEVENGQINSKFISDRESRRSLTNSHLEKKKCDEYIPGTTSLGMSVFNLSNAIMGSGILGLAFAL-ANTGILLFLVLLTSVTLLSIYSINLLLICSKET-GCMVYEKLGEQVFGTTG-KFVIFGATSLQNTGAMLSYLFIVKNELPSAIKFLMGKEETFSAWYVDGRVLVVIVTFGIILPLCLLKNLGYLGYTSGFSLSCMVFFLIVVIYKKFQIPCIVPELNSTISANSTNADTCTPKYV-TFNSKTVYALPTIAFAFVCHPSVLPIYSELKDRSQKKMQMVSNISFFAMFVMYFLTAIFGYLTFYDNVQS----D-LLHKYQSK-DDILILTVRLAVIVAVILTVPVLFFTVRSSLFELAKKTKFN------LCRHTVVTCILL--VVINLLVIFIPSMKDIFGVVGVTSANMLIFILPSSLYLKITDQDGDKGTQRIWAALFLGLGVLFSLVSIPLVIYDWACSSSSDEGH |
| 3GIA Chain:A ((4-370)) | ------------------------------------------------------------------KNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAG-RNLPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIGDNIITGALSILLWMSYVISIALFAKGFAGYFLPLINAPI------NTFN----IAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIH--P-S------------YVIPDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPK-KNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKST-EGLYITSALGVLF-ALLFNMEGVASITSA--VFMVIYLFVILSHYILIDEVGGRKEIVIFSFIVVLGVFLLLLYYQWITNRFVFYGIIATFIG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GIA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -381881 for 3120 contacts (-122.4/contact) +
2D Compatibility (PS) -35227 + (NN) -7247 + (LL) 5064
1D Compatibility (HY) -10800 + (ID) 1650
Total energy: -431741.0 ( -138.38 by residue)
QMean score : 0.233
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