Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVGYDPKPDGRNNTKFQVAVAGSVSGLVTRALISPFDVIKIRFQLQHERLSRSDPSAKYHGILQASRQILQEEGPTAFWKGHV-------PAQILSIGYGAVQFLSFEMLTELVHRGSVYDAREFSVHFVCGGLAACMATLTVHPVDVLRTRFAA----QGEPKVYNTLRHAVGTMYRSEGPQVFYKGLAPTLIAIFPYAGLQFSCYSSLKHLYKWAIPAEGKKNENLQNLLCGSGAGVISKTLTYPLDLFKKRLQVGGFEHARAAFGQVRRYKGLMDCAKQVLQKEGALGFFKGLSPSLLKAALSTGFMFFSYEFFCNVFHCMNRTASQR
4C9Q Chain:A ((34-306))---------------------GGVSAAIAKTAASPIERVKILIQNQDEMIKQGTLDKKYSGIVDCFKRTAKQEGLISFWRGNTANVIRYFPTQALNFAFKDKIKLMFGFKKE-GY------GKWFAGNLASGGAAGALSLLFVYSLDFARTRLAADAKS---ARQFNGLTDVYKKTLKSDGIAGLYRGFMPSVVGIVVYRGLYFGMFDSLKPL-------------FLASFLLGWVVTTGASTCSYPLDTVRRRMMM--------TSGQAVKYNGAIDCLKKIVASEGVGSLFKGCGANILRSVAGAGVISMYDQLQMILFGK--------


General information:
TITO was launched using:
RESULT:

Template: 4C9Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71340 for 1830 contacts (-39.0/contact) +
2D Compatibility (PS) -25714 + (NN) -1805 + (LL) 2920
1D Compatibility (HY) -14400 + (ID) 3800
Total energy: -114139.0 ( -62.37 by residue)
QMean score : 0.122

(partial model without unconserved sides chains):
PDB file : Tito_4C9Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4C9Q-query.scw
PDB file : Tito_Scwrl_4C9Q.pdb: