Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEAKEKQHLLDARPAIRSYTGSLWQEGAG---WIPLPRPGLDLQAIELAAQSNHHCHAQKGPDSHCDPKKGKAQRQLYVASAICLLFMIGEVVEILGALVSVLSIWVVTGVLVYLAVERLISGDYEIDGGTMLITSGCAVAVNIIMGLTLHQSGHGHSHGTTNQQEENPSVRAAFIHVIGDFMQSMGVLVAAYILYFKPEYKYVDPICTFVFSILVLGTTLTILRDVILVLMEGTPKGVDFTAVRDLLLSVEGVEALHSLHIWALTVAQPVLSVHIAIAQNTDAQAVLKTASSRLQGKFHFHTVTIQIEDYSEDMKDCQACQGPSD |
| 3OG4 Chain:B ((135-193)) | -------------PLDLKYEVAFWKEGAGNKTLFPVTPHGQPVQITLQPA--EHHCLSARTIYTFSVPKYSKFSKPTCFLL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OG4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4890 for 250 contacts (19.6/contact) +
2D Compatibility (PS) -5576 + (NN) 544 + (LL) 22828
1D Compatibility (HY) -1200 + (ID) 850
Total energy: 20636.0 ( 82.54 by residue)
QMean score : 0.172
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