Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNDPNSCVDNATVCSGASCVVPESNFNN---ILSVVLSTVLTILLALVMFSMGCNVEI--KKFLGHIKRPWGICVGFLCQFGIMPLTGFILSVAFDILPLQAV-VVLIIGCCPGGTASNILAYWVDGDMDLSVSMTTCSTLLALGMMPLCLLIYTKMWVDSGSIVIPYDNIGTSLVSLVVPV-SIGMFVNHKWPQKAK-IILKIGSIAGAILIVLIAVVGGILYQSAWIIAPKLWIIGTIFPVAGYSLGFLLARIAGLPWYRCRT-VAFETGMQNTQLCSTIVQLSFTPEELNVVFTFPLIYSIFQLAFAAIFLGFYVAYKKCHGKNKAEIPESKENGTEPESSFYKANGGFQPDEK |
| 4B46 Chain:A ((1-367)) | MKLAMIGFGQAGGKVVDKFVEYDRERNAGIVRAAVAVNSAKADLLGLKNIPKDQRVLIGQSRVKGH-----GVGADNELGAEIAEEDIDEVQGAIDSIPVHEVDAFLVVSGLGGGTGSGGAPVLAKHLKRIYTE-----PVYGLGILP-----------GSDEGGIYTLNAARSFQTFVREVDNLLVFDNDAWRKTGESVQGGYDEINEEIVNRFGVLFGSVVDSSEIINTLAGGGVSTVGYASEGVTAHTTNRITSLVRKAALGRLTLPCEIEGAE--RALLVLAGPPEHLNRKGIERGRKWIEEQTGSMEVRGGDYPIPG-AEKVAGVILLSGVTNVPRIKELQQVAIEAQD--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B46.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -312040 for 2933 contacts (-106.4/contact) +
2D Compatibility (PS) -33246 + (NN) 2906 + (LL) 2656
1D Compatibility (HY) 2400 + (ID) 2750
Total energy: -340074.0 ( -115.95 by residue)
QMean score : 0.068
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