Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEPGRTQIKLDPRYTADLLEVLKTNYGIPSACFSQPPTAAQLLRALGPVELALTSILTLLALG-SIAIFLEDAVYLYKNTLCPIKRRTL----LWKSSAPTVVSVLCCFGLWIPRSLVLVEMTITSFYAVCFYLLMLVMVEGFGGKEAVLRTLRDTPMMVHTGPCCCCCPCCPRLLLTRKK-LQLLMLGPFQYAFLKITLTLVGLFLVPDG-------------------------IYDPADISEGSTALWINTFLGVSTLLALWTLGIISRQARLHLGEQNMGAKFALFQVLLILT-----ALQPSIFSVLANGGQIACSPPYSSKTRSQVMNCHLLILETFLMTVLTRMYYRRKDHKVGYETFSSPDLDLNLKA |
| 1D2R Chain:A ((1-326)) | ---------------------------MKTIFSGIQPS-GVI--TIGNYIGALRQFVELQH-EYNCYFCIVDQHAITV----------WQDPHELRQNIRRLAALYLAVGIDPTQATLFIQSEVP-AHAQAAWMLQCIVYIGELERMTQFKEKSAGAAAAAAGLLTYPPLMAADILLY---NTDIVPVGEDQKQHIELTRDLAERFNKRYGELFTIPEARIPKVGARIMSLVDPTKKMSKSDPNPKAYITLL---DDAKTIEKKIKSAVTDSEGTIRYDKEAKPGISNLLNIYSTLSGQSIEELERQYEGKGYGVFKADLAQVVIETLRPIQERYHHWMESEELDRVLDEG--AEKANRVASEMVRKMEQAMGLGR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D2R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -296212 for 2203 contacts (-134.5/contact) +
2D Compatibility (PS) -28500 + (NN) 4302 + (LL) 3260
1D Compatibility (HY) -3600 + (ID) 1650
Total energy: -322400.0 ( -146.35 by residue)
QMean score : 0.127
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