Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------MVLMQDKGSSQQWPGLGGEGGGTGPLSMLRAALLLIS-LPWGAQGTASTSLSTAGGHTVPP--------TGGRYLSIGD--GSVMEFEFPEDSE-----GIIVI------SSQYPGQANRTAPGPMLRVTSLDTEVLTIKNVSAITWGGGGGFVVSIHSGLAGLAPLHIQLVDAHEAPPTL--IEERRDFCIKVSPAEDTPATLSADLAHFSENPI------LYLLLPLIF---VNKCSFGCKVEL-------EVLKGLMQSPQPMLLGLLGQFLVM-----PLYAFLMAK-----VFMLPKALALGLIITCSSPGGGGSYLFSLLLGGDVT-------------------------------LAISMTFLSTVAATGFLPL-----------------------------SSAIYSRLLSIHETLHVPISKILGTLLFIAIPIAV------------GVLIK--SKLPKFSQLLLQVVKPFS--------------FVLLLGGLFLAYRMGVFILAGIRLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRTV-------------------SIEVGVQNSLLALAMLQLSLRRLQADYASQAPF----IVALSGTSEMLALVIGHF-------------IYSSLFPVP-------------------------- |
| 4WRT Chain:A ((14-730)) | SMDTFITRNFQTTIIQKAKNTMAEFSEDPELQPAMLFNICVHLEVCYVISDMNFLDEEGKAYTAN--LRPQYEVIEGMPRTIAWMVQRSLAQEHGIETPKYLADLFDYKTKRFIEVGITKGLADDYFWKKKEKLGNSMELMIFSYNQDYSLSNESSLDEEGKGRVLSRLTELQAELSLKNLWQVLIGEED-----VEKGIDFKLGQTISRLRDISVPAGFSNFEGMRSYIDNIDPKGAIERNLARMSPLVSVTPKKLTWEDLRPIGPHIYNHELPEVPYNAFLLMSDELGLANMTEGKSKKPKTLAKECLEKYSTLRDQTDPILIMKSEKANENFLWKLWRDCVNTISNEEMSNELQKTNYAKWATGDGLTYQKIMKEVAIDDETMCQEEPKIPNKCRVAAWVQTEMNLLSTLTSKRALDLPEIGPDVAPVEHVGSERRKYFVNEINYCKASTVMMKYVLFHTSLLNESNASMGKYKVIPITNRVVNEKGESFDMLYGLAVKGQSHLRGDTDVVTVVTFEFSSTDPRVDSGKWPKYTVFRIGSLFVSGREKSVYLYCRVNGTNKIQMKWGMEARRCLLQSMQQMEAIVEQESSIQGYDMTKACFKGDRVNSPKTFSIGTQEGKLVKGSFGKALRVIFTKCLMHYVFGNAQLEGFSAESRRLLLLIQALKDRKGPWVFDLEGMYSGIEECISNNPWVIQSAYWFNEWLGFEKEGSKV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4WRT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -237051 for 2844 contacts (-83.4/contact) +
2D Compatibility (PS) -48783 + (NN) -2671 + (LL) 496
1D Compatibility (HY) -20400 + (ID) 4200
Total energy: -312609.0 ( -109.92 by residue)
QMean score : 0.048
|
|
|