Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYMKKLKFITLTLAIIITLPMLQSCLDDNDHQSRSLVISTINQISEDSKEFYFTLDNGKTMFPSNSQAWGGEKFENGQRAFVIFNELEQPVNGYDYNIQVRDITKVLTKEIVTMDDEENTEEKIGDDKINATYMWISKDKKYLTIEFQYYSTH--SEDKKHFLN--LVINNKEADSAAENEDNTDDEYINLEFRHNSERDSPDHLGEGYVSFKLDKIEEQIEGKKGLNIRVRTLYDGIKNYKVQFP |
2B2A Chain:A ((13-191)) | MLTRKEDLLTVLKQI--------------------------SALKYVSNLYEFLLATEKIVQTSELD----TQFQEFLTTTIIASE-QNLVENY----KQMTIKQVIDDSIILLGNKQNYVQQIGTTTIG---FYVEYRQTLYSSNFRNLLNIFGEEDFKYFLIDFLVFTKVEQNGYLQVAGVCLNQYFSVQVKQKKWYKNN-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B2A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 42279 for 1080 contacts (39.1/contact) +
2D Compatibility (PS) -16754 + (NN) -7230 + (LL) 5020
1D Compatibility (HY) -12000 + (ID) 1550
Total energy: 9765.0 ( 9.04 by residue)
QMean score : 0.100
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