Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRPVFILGIILLLVGCKQRDERVLMVDEQGSFAVGGTVLVDSLGHTFHGDHAYVFYQKPVGARKYPLVFAHGVGQFSKTWETTPDGREGFQNIFLRRRFCVYLVDQPRRGNAGRGTESVTISPAFDEEVWFNRFRVGIWPDYFEGVQFKRDKETLDQYFRQMTPTIGTTDFEVYSDAYAALFDKIGPGVFITHSQGGPVGWNTLLKTRN-IKAIASYEPGGAVPFPEGQLPEEAKFITLSKKMEGIEVPMSVFMEYTKVPIVIYYGDNLPETDERPELYEWTRRLRLMK---------IWAKMLNDQGGDVTVIHLPEVGLHGNTHFPMSDLNNIEVADLLSEWLHTKALD |
2WTM Chain:A ((2-251)) | -----------------------------------GAMYIDCDGIKLNAYLDMPKNNPE---KCPLCIIIHGFTG-----HSEERHIVAVQETLNEIGVATLRADMYGHGKSDGK---------------------------FEDHTLFKWLTNILAVVDYAKKL-----------------DFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAA-------MIPEIARTGELLGLKFDPENIPDELDAWDGRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQYKNCKLVTIP------GDTHCYDH-HLELVTEAVKEFMLEQIAK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WTM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51854 for 2085 contacts (-24.9/contact) +
2D Compatibility (PS) -25769 + (NN) -7652 + (LL) 7256
1D Compatibility (HY) -3200 + (ID) 1600
Total energy: -82819.0 ( -39.72 by residue)
QMean score : 0.198
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