Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MKKMEKKWPFVFNGIV-----IFCLILLILGMRWQAKKEESEVLNVTESLQKESEITSFSEEEEAVLYM-------LSALKKNDLDMALRGCAIDETALQIN--------FVKTAEELPGMQ----LIDLPAPTSDYSYYFPLTSAEMTKAYIEQFEELSTEIPEIETLEVLEIAEKKEKEREEQLAECLAAQEVSELEIYVKCGEQSYRLGFTAVQYEKNWKIHSLKEGLL-YETDIPACVQMEEMREAKKTYVLPNQLTGANYFQAMPISEKTPQRAVEQFIYAIEKGDLTRALAFATTESSQDTSPELLKKQGEYAKELKTMLYGFLGTEDARLYGKSEEQLNKLRGKLNPEYMVYLDLIKVIPIETEENTETVKQYAGLYSYNGKNYLTGYTLCRQEDGWQIQSLSAPALSLESGEVMRLS---KEESRKTSEQSVLKAEKNER------------- |
| 4C2E Chain:A ((2-436)) | ADSERDKAMDKIEKAYELISNEYVEKVDREKLLEGAIQGMLSTLNDPYSVYMDKQTAKQFSDSLDSSFEGIGAEVGMEDGKIIIVSPFKKSPAEKA--GLKPNDEIISINGESMAGKDLNHAVLKIRGKKGSSVSMKIQRPGTKKQLSFRIKRAEIPLETVFASEKKVQG-HSVGYIAISTFSEHTTEDFAKALRE-LEKKEIEGLVIDVRGNPGGY--------------IQSVEEILKHFVTKDQPYIQIAERNGDKKRY--FSTLTHKKAYPVNVITDKGSAAASEILAGALKEAGHYDVVG---DTSFGKGTVQQAVPMGDGS-NIKLTLYKWLTPNGNWIHKKGIEPTIAIK---QPDYFSAGPLQLKEPLKVDMNNEDVKHAQVLLKGLSFDP-------GREDGYFSKDMKKAVMAFQDQNKLNKTGIIDTRTAETLNQQIEKKKSDEKNDLQLQTALKSLF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C2E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 57842 for 2960 contacts (19.5/contact) +
2D Compatibility (PS) -40178 + (NN) -6373 + (LL) 2940
1D Compatibility (HY) -8000 + (ID) 3950
Total energy: 2281.0 ( 0.77 by residue)
QMean score : 0.143
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