Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GRIPSPPSKTSLDIAEELQNDKGVSFAFQAREEELGAFTKRTLFAYSGDGLTGPFKAPASAELSSFLTAHPKGRWLIAFPLGTGIVSVDEGILTLEISRSLPEVGS--GSSFYLTEK
1JMX Chain:A ((282-363))
--------------------GKARLLAVQPAFIKAGG---ESEITLVGSGLAGKPDLGAGVEVTEVLEQTPT---LVRLKA---RAAADAKPGQREVA-----VGTLKGVNLAVYD-
General information:
TITO was launched using:
RESULT:
Template:
1JMX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40537 for 580 contacts (-69.9/contact) +
2D Compatibility (PS) -8416 + (NN) -2725 + (LL) 932
1D Compatibility (HY) -1200 + (ID) 900
Total energy: -52846.0 ( -91.11 by residue)
QMean score : 0.184
(partial model without unconserved sides chains):
PDB file :
Tito_1JMX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JMX-query.scw
PDB file :
Tito_Scwrl_1JMX.pdb
: