Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MSYTLFEIGPF---ALDSFGWKETIPPKKDGDSEKVVRMASPIIVNARFSDPITGVEKLIITNNNGKKDIFESDILTTRNLPSLIKYGYSINEKYIRSLSYALQLMRDRLPLSELYEGVGILETPFGYLISLDKVLKSIQFNQSSPSYPIVDSAYDLTPKGTFDNWFNMYIDEVKGHLLLELAV-IFGISALVTSFLKHKHEIEFAGILFSFTGQSSTGKSTAAALAVSVAGNPTKGNETLFRSWNATRNALEGYLSNNYG-----------IPIVFDE-------------------LSSTTLRDTTGLLYSIAEGQGRQRSNVHGEVKTPKNWGTSVISTSEYSIFNDSAQNDGLRV----RTIEINEQ-------------------FTTNATNADNIKKAVALNYGHVLPLVAKYLINR-------EDEVIQWFYKEVDWFEAKLKDETNNTGIRMFKRYAVITTSAKILGRVLSTDIDIANIRDYFIDYHTHTVSERSLADKAIDVIIQFVAQNRGKFSDEGALKNMFENYGLISL--KDDHIEVKIIANVFKQMLNNHQFQDVNNVVNALRDKGFILADRGRQTTKRSVKDNSGK---------KQSLVFYHLK---------LDVEFASILGLTKDKSLLQNWTPSNDN----KAAKELFKSANEG---------IGPSGVHEDF--------------------------------------------------------------------------------------------------------------------------------------------- |
| 1B7T Chain:A ((5-835)) | FSDPDFQYLAVDAFDGKKNCWVPDEKEGFASAEIQSSKGD-------------EITVKIVADSS-----TRTVKKDDIQSMNPPKFEKLEDMANMT-YLNE---ASVLYNLRSRYT----------SGLIYTYSGLFCIAVNPYRRLPIYT------------------------DSVIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRE----NQSCLITGESGAGKTENTKKVIMYLAKVACAEGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSF--INQGCLTVDNIDDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERL--QQFFNHHMFILEQEEYKKEG--IAWEFIDFGMDLQMCIDLIEKPMG-----ILSILEEECMFPK-ADDKSFQDKLYQN---HMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGRKGFPSRLIYSEFKQRYSILAPNAIPDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQWWKLYSKVKP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B7T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58253 for 3478 contacts (-16.7/contact) +
2D Compatibility (PS) -54896 + (NN) -19054 + (LL) 5760
1D Compatibility (HY) -12400 + (ID) 3450
Total energy: -142293.0 ( -40.91 by residue)
QMean score : 0.275
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