Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
KDAELQEREYHLKELR-----EQLAKQTVAIAELT--EELQSKCIQLNKLQ
1VF6 Chain:C ((120-170))
QDPDVEDLFSSLKHIQHTLVDSQSQEDISLLLQLVQNRDFQNAFKIHNAVT
General information:
TITO was launched using:
RESULT:
Template:
1VF6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3271 for 209 contacts (15.7/contact) +
2D Compatibility (PS) -5215 + (NN) -7163 + (LL) 0
1D Compatibility (HY) -1200 + (ID) 350
Total energy: -10657.0 ( -50.99 by residue)
QMean score : 0.708
(partial model without unconserved sides chains):
PDB file :
Tito_1VF6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1VF6-query.scw
PDB file :
Tito_Scwrl_1VF6.pdb
: