Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MVKKTVRFGEQAAVPAIGLGTWYMGEHAAQRQQEVAALRAGIDHGLTVIDTAEMYADGGAEEVVGQAIRGL-------RDRVVLVSKVYPWHAGKAAMHRACENSLRRLQTDYLDMYLLHWR--------------------GDIPLQETVEAMEKLVAEGKIRRWGVSNLDIEDMQALWRTADGE-HCATNQVLYHLASRGIEYDLLPWCQQHSLPVMAYCPLAQA------GRLRDGLFQHSDIINMANARGITVAQLLLAWVIRHPGVLAIPKAASIEHVVQNAAALDIVLSGEELAQLDRLYPPPQRKNRLDMV----------- |
| 1J96 Chain:A ((1-323)) | DDSKYQCVKLNDGHFMPVLGFGTYAPAE--VPKSKALEAVKLAIEAGFHHIDSAHVYNN---EEQVGLAIRSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPGEEVIPKDENGKILFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNHRLLEMILNKPGLKYKPVCNQVECHPYFN--QRKLLDFCKSKDIVLVAYSALGSHREEPWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQR-GVVVLAKSYNEQRIRQNVQVFEFQLTSEEMKAIDGLNRNVRYLTLDIFAGPPNYPFSDEY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J96.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179105 for 2301 contacts (-77.8/contact) +
2D Compatibility (PS) -29988 + (NN) -12861 + (LL) -120
1D Compatibility (HY) -18000 + (ID) 3600
Total energy: -243674.0 ( -105.90 by residue)
QMean score : 0.502
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