Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSLVKIMGSFLALSLIMIFSSCIVNEHVDEGNIKENAVRMMECIVNKDSEKLFDFYNKD---MKDNYKD--SSLDEIRQLFEY--IDGAITSYNYEGKGGGQEAKNDGIICYYSCHPEFDFTTETGQEYTISFSYHYIWNEHPEYEGINMIQICKDGNWGEK-LIIGRNYYKE
1QJG Chain:A ((1-125))
---------------------------MNTPEHMTAVVQRYVAALNAGDLDGIVALFADDATVENPVGSEPRSGTAAIREFYANSLKLPLAVELTQEVRAVA-----NEAAFAFIVSFEYQ-----GRKTVVAPIDHFRFNG----AG--KVVSMR-ALFGEKNIHAGA-----
General information:
TITO was launched using:
RESULT:
Template:
1QJG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38183 for 746 contacts (-51.2/contact) +
2D Compatibility (PS) -12457 + (NN) -3702 + (LL) 3856
1D Compatibility (HY) -400 + (ID) 800
Total energy: -51686.0 ( -69.28 by residue)
QMean score : 0.293
(partial model without unconserved sides chains):
PDB file :
Tito_1QJG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QJG-query.scw
PDB file :
Tito_Scwrl_1QJG.pdb
: