Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAFSRFTPLIQSLPASVPFV-GPEALERQHGRKIAARIGANESGFGPAPSVLLAIRQAAGDT-WKYADP-ENHDLKQALARHLG------TSPANIAIGEGIDGLLGQIVRLVVEAGAPVVTSLGGYPTFNYHVAGHGGRLVTVPYA--DDREDLEGLLAAVGRENAPLVYLANPDNPMGSWWPAERVVAFAQALPETT-LLVLDEAYCETAPRDALPPIE-SLIDKPNVIRARTFSKAYGLAGARIGYTLSTPGTAQAFDKIRNH--FGMSRIGVAAAIAALADQDYLKEVTLKIANSRQRIGRIAADSGLAPL-PSATNFVAVDCGKDASYARAIVDRLMSDHGIFIRMPGVAPLNRCIRISTAPDAEMDLLAAALPEVIRSLAAT |
| 1O4S Chain:A ((14-388)) | ------VSRRISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEVD--NSYMVQTFKERKNFVVERLKKMGVKFVEPEGAFYLFFKVRG---DDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFATS--IERLTEALDRIEDFLNS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O4S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178638 for 3074 contacts (-58.1/contact) +
2D Compatibility (PS) -40025 + (NN) -32838 + (LL) 884
1D Compatibility (HY) -15600 + (ID) 3150
Total energy: -269367.0 ( -87.63 by residue)
QMean score : 0.521
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