Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MRYRPFGSTGVAVSALTLRLADNPRLRANDWRALVFTALENGVNSF---QIDGDAPELLKGAGEAFAS--VERHLLFLTWRLRGDAKQLGPHTLDALKRSAFEGLSLDYLDLLLINDPQSASLP-------------------MAFESGLQDLQK-GRALRGLGVASRGDIDPGLLANDLVTA------VSSPYNLSSGWAERHRIRQASQNNFAVIGEDFWPQALREVADKAPP-KPSFWQR-RTDPLADVGGYEFLTNTPGWSAEDICLGYALTEPSLATVRVTADNRQEIERLAAVVERDLPTGVCAQIEMARFSAQER-------EKAARRP-------- |
| 1J96 Chain:A ((1-323)) | DDSKYQCVKLND-GHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSN--SHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPGEEVIPKDENGKILFDTVDLCATWEAMEKCKDAGLA-KSIGVSN---FNHRLLEMILNKPGLKYKPVCNQVECHPYFNQRKLLDFCKSKDIVLVA--YSALGSHREEPWVDPNSPVLLEDPVLCALAKKHKR-----TP---AL-IALRYQLQRGV--VVLAKSYNEQRIRQNVQVFEFQLT-----SEEMKAIDGLNRNVRYLTLDIFAGPPNYPFSDEY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J96.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83624 for 2170 contacts (-38.5/contact) +
2D Compatibility (PS) -29295 + (NN) -12382 + (LL) 1172
1D Compatibility (HY) -15600 + (ID) 2800
Total energy: -142529.0 ( -65.68 by residue)
QMean score : 0.322
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