Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MASWSHPQFEKGADDDDKSEPPVSMLMQVAG------AVE-TSKGGEKWAPVTRNKFLFV---GTQVRTGADGGG------KLIDQNSGMAQTIGANSVVEITAAGPKAVSGSLSAPE-A-ASGDLVA-GLSNRFAEAQRYTTVRRSVKKEAADLKLRVASDITLSPTYPDLVWENMG-AQYGY-TLVIDGTSHAVPATSGEMVRFRVPSLT-PGAHSFGVTVTEGGQAVGQTEKGGTIVWLSATEDK-ALVDGVARVKA-ASTGDEFALGNYLDSKGVTVAAMDAYRKHFASHKDDNDMRPLLIKTYNDLKLRDLRQKEALVYNEQLEGNPGFSSISAHHHHHHHHHH |
| 3DSM Chain:A ((1-327)) | ASGLFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKT-YEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPT-------SLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINNDIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAI---------DYQQQGIVYRY---------SPQGKLIDEFYVGIIPGAFCWKLEHHHHH---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DSM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10558 for 2180 contacts (4.8/contact) +
2D Compatibility (PS) -31311 + (NN) -2175 + (LL) 1580
1D Compatibility (HY) -8400 + (ID) 2400
Total energy: -32148.0 ( -14.75 by residue)
QMean score : 0.078
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