Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRAPLKRSRILHMALTGASDPSAEAEANGEKPFLLRALQIALVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGGFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACILFLPLLLLLGELQALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEETKSFLWWTSNMMVLGGSSAYTWVRGWEMKKTPEEPSPKDSEKSAMGV |
| 2LGZ Chain:A ((1-273)) | MGSSHHHHHHSSGLVPRGSHSTWVTRTAYSSPS----------------------VVLPSQTPDGKLALIDDFREAYYWLRMNSDEDSKVAAWWDYGYQ---------------IGGMADRTTLVDNNTWNNTHIAIVGKANASPEEK---------SYEILKEHDVDYVLVIFGGLIGFGGDDINKFL------WNIRISEGIWPEEIKERDFYTAEGEYRVDA------------------------RASETMRNSLLYKMSYK----DFPQLFNGGQATDRVRQQMITPLDVPPLDYFDEVFTSENWNVRIYQLKKDD--------AQGRTLRDV---GELTRSSTKTRRSIKRPELGLRV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LGZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88669 for 2252 contacts (-39.4/contact) +
2D Compatibility (PS) -27541 + (NN) 276 + (LL) 9472
1D Compatibility (HY) 5200 + (ID) 1950
Total energy: -103212.0 ( -45.83 by residue)
QMean score : 0.067
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