Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MARRTEPPDGGWGWVVVLSAFFQSALVFGVLRSFGVFFVEFVAAFEEQAARVSWIASIGIAVQQFGSPVGSALSTKFGPRPVVMTGGILAALGMLLASFATSLTHLYLSIGLLSGSGWALTFAPTLACLSCYFSRRRSLATGLALTGVGLSSFTFAPFFQWLLSHYAWRGSLLLVSALSLHLVACGALLRPPSLAEDPAVGGPRAQLTSLLHHGPFLRYTVALTLINTGYFIPYLHLVAHLQDLDWDPLPAAFLLSVVAISDLVGRVVSGWLGDAVPGPVTRLLMLWTTLTGVSLALFPVAQAPT-----ALVALAVAYGFTSGALAPLAFSVLPELI-GTRRIYCGLGLLQMIESIGGLLGPPLSGYLRD-VTGNYTASFVVAGAFLLSGSGILLTLPHFFCFSTTTSGPQDLVTEALDTKVPLPKEGLEED |
| 4TPH Chain:A ((40-196)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VQRLGFDDSRANLVWSACAALIYVSPAIGGWVGDKILG-TKRTMLLGAGILSVGYALMTVPTENTWFMFSALGVIVVG----NGLFKPNAGNLVRKIYE--SKIDSAFTIYYMAVNVGSTFSMLLTPWIKDYVNAQYGNEFGWHAAFAVCCVGILVGLGNYALMHKSLANYGSEPDTRPVNKKSLAIVLALAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TPH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95617 for 986 contacts (-97.0/contact) +
2D Compatibility (PS) -14571 + (NN) -3890 + (LL) 17436
1D Compatibility (HY) -14000 + (ID) 1950
Total energy: -112592.0 ( -114.19 by residue)
QMean score : 0.102
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