Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSSVTALGQARSSGPGMAPSACCCSPAALQRRLPILAWLPSYSLQWLKMDFVAGLSVGLTAIPQALAYAEVAGLPPQYGLYSAFMGCFVYFFLGTSRDVTLGPTAIMSLLVSFYTFHEPAYAVLLAFLSGCIQLAMGVLRLGFLLDFISYPVIKGFTSAAAVTIGFGQIKNLLGLQNIPRPFFLQVYHTFLRIAETRVGDAVLGLVCMLLLLVLKLMRDHVPPVHPEMPPGVRLSRGLVWAATTARNALVVSFAALVAYSFEVTGYQPFILTGETAEGLPPVRIPPFSVTTANGTISFTEMVQDMGAGLAVVPLMGLLESIAVAKAFASQNNYRIDANQELLAIGLTNMLGSLVSSYPVTGSFGRTAVNAQSGVCTPAGGLVTGVLVLLSLDYLTSLFYYIPKSALAAVIIMAVAPLFDTKIFRTLWRVKRLDLLPLCVTFLLCFWEVQYGILAGALVSLLMLLHSAARPETKVSEGPVLVLQPASGLSFPAMEALREEILSRALE-VSPPRCLVLECTHVCSIDYTVVLGLGELLQDF--QKQGVALAFVGLQVPVLRVLLSADL---KGFQYFSTLEEAEKHLRQEPGTQPYNIREDSILDQKVALLKA |
| 2OOK Chain:A ((19-126)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VFFVTLKAIGTL-THEDYLVITPMLEGALSQVDQPKVSLFLDATELDGWDLRAA--WDDLKLGLKHKSEFERVAILGNKDWQEWAAKIGSWFIAGEIKYFEDEDDALKWLRY------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OOK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61521 for 677 contacts (-90.9/contact) +
2D Compatibility (PS) -10779 + (NN) 439 + (LL) 38544
1D Compatibility (HY) -400 + (ID) 750
Total energy: -34467.0 ( -50.91 by residue)
QMean score : 0.482
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