Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------MEAARTAVLRVKRKRSAEPAEALVLACKRLRSDAVESAAQKTSEGLERAAEN------NVFHLVATVCSQEEPVQPLLREVLRPS------RDSQQRVRRNLRASAREVRQEGRYRVLSSRRSLGTTSSGQESEYTPG-------NPEAAGNSGFQLLDLVH----EEGEPEAASAGSCKTSDPDVI----LCNSVELIRER-------LTVSEDG-------PGVRRQEEQKHDDYVYDIYYLETATPGWIENILSVQPYSQEWELVNDDQEPEDIYDDEDDENSENNWRNEYPEEESSDGD-EDSRGS-----ADYNSLSEEERGSSRQR-----MWSKYPLDVQKEFGYDSPHDLDSD--------- |
| 4WZI Chain:A ((85-576)) | VTPFAQVLASLRSVRNNFTIQKLAMETLEELDWALDQLETIQTYRSVSEMASNKFKRMLNRELTHLSEMSRCGNQVSEYISNTFLDKENEDHLAKELEDLNKWGLNIFNVAGY--SHNRPLTAIMYAIFQERDLLKTFRISSDTFITYMMTLEDHYHSDVAYH--NSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVSNQFLINTNSELALMYNDESVLENHHLAVGFKLLQEEHADIFMNLTKKQRQTLRKMVIDMVLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRNMVHAADLSNPTKSLELYRQWTDRIMEEFFQQGDKERERGMEISPMADKHTACVEKSQVGFIDYIVHPLWETWADLVQPD-AQDILDTLEDNRNWYQAMIP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WZI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 121860 for 2102 contacts (58.0/contact) +
2D Compatibility (PS) -31493 + (NN) 2879 + (LL) 748
1D Compatibility (HY) -8400 + (ID) 2550
Total energy: 83044.0 ( 39.51 by residue)
QMean score : 0.164
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