Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------MEAKEKQHLLDARPAI-RSYTGSLWQEGAGWIPLPRPGLDLQAIELAAQSNHHCHAQKGPDSHCDPKKGKAQRQLYVASAICLLFMIGEVVEILGALVSVLSIWVVTGVLVYLAVERLISGDYEIDGGTMLITSGCAVAVNIIMGLTLHQSGHGHSHGTTNQQEENPSVRAAFIHVIGDFMQS--------MGVLVAAYILYFKPEYKYVDPICTFVFS----ILVLGTTLTILRDVILVLMEGTPKGVDFTAVRDLLLSVEGVEALHSLHIWALTVA-QPVLSVHIAIAQN------TDAQAVLKTAS--SRLQGKFHFHTVTIQIEDYSEDMKDCQACQGPSD-------------- |
| 4D10 Chain:B ((34-447)) | VDLENQYYNSKALKEDDPKAALSSFQKVLELEGEKGEWGFKALKQMIKINFKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEA----LKDAKNDRLWFKTNTKLGKLYLERE--EYGKLQKILRQLHQSCQTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKS--AIPHPLIMGVIRECGGKMHLRE-----GEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLM-KSGINPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRIDQVNQLLELDHQKRGGARYTALDKWTNQLNSLNQAVVSKLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D10.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145924 for 2141 contacts (-68.2/contact) +
2D Compatibility (PS) -31667 + (NN) -5419 + (LL) 728
1D Compatibility (HY) -8800 + (ID) 2350
Total energy: -193432.0 ( -90.35 by residue)
QMean score : 0.255
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