Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MDESPEPLQQGRGPVPVRRQR---PAPRGLRE--MLKARLWCSCSCSVLCVRAL-----VQDLLPATRWLRQYRPR---EYLAGDVMSGLVIGIILV--PQAIAYSLLAGLQPIYSLYTSFFANLIYFLMGTSRHVSVGIFSLLCLMVGQVVDRELQLAGF--DPSQDGLQPGANSSTLNGSAAM----LDCGRDCYAIRVATALTLMTGLYQVLMGVLRL-GFVSAYLSQPLLDGFAMGASVTILTSQLK------HLLGVRIPRHQGPGMVVLTWLSLLRGAGQANVCDVVTSTVCLAVLLAAKELSDRYR----------HRLRVPLPTELLVIVVATLVSHFGQLH--------------------KRFGS-SVAGDIPT-GFMPPQVPEP---RLMQRVALDA-VALALVAAAFS--------ISLAEMFARSHGYSVRANQELLAVGCCNVLPAFLHCFATSAALAKSLVKTATGCRTQLSSVVSATVVLLVLLALAPLFHDLQRSVLACV----IVVSLRGALRKVW---------------------DLPRLWRMSPA----DALVWAGTAATCMLVSTEAGLLAGVILSLLSLAGRTQRPRTALLARIGDTAFYEDATEFEGLVPEPG---VRVFR-FGGPLYYANKDFFLQSLYSLTGLDAGCMAARRKEGGSETGVG---------EGGPAQGEDLGPV--STRAALVPAAAGFHTVVIDCAPLLFLDAAGVSTLQDLRRDYGALGISLLLACCSPPVRDILSRGGFL------GEGPGDTAEEEQ-LFLSVHDAVQTARARHRELEATDAHL |
| 4J5T Chain:A ((1-811)) | AEFMEEYQKFTNESLLWAPYRSNCYFGMRPRYVHESPLIMGIMWFN-SLSQDGLHSLRHFATPQDKLQKYGW-EVYDPRIGGKEVFIDEKNNLNLTVYFVKSKNGENWSVRVQGEPLDPKRPSTASVVLYFSQNGGEIDGKSSLAMI----GHDGPNDMKFFGYSKELGEYHLTVKDNFGHYFKNPEYETMEVAPGSDC---SKTSHLSLQIPDKEVWKARDVFQSLVSDSIRDILERPADLIPSVLTIRNLYNFNPGNFHYIQKTFDLTKKDGFQFDITYNKLGTTQSISTREQVTELITWSLNEINARFDKQFSFGEGPDSIESVEVKRRFALETLSNLLGGIGYFYGNQLIDRETEFDESQFTEIKLLNAKEEGPFELFTSVPSRGFFPRGFYWDEGFHLLQIMEYDFDLAFEILASWFEMIEDDSGWIAREIILGNEARSKVPQEFQVQNPNIANP-PTLLLAFSEMLSRAIENIGDFMTNNLEANPGLLTEYAKKIYPKLLKHYNWFRKSQTGLIDEYEEILEDEGIWDKIHKNEVYRWVGRTFTHCLPSGMDDYPRAQPPDVAELNVDALAWVGVMTRSMKQIAHV-------LKLTQDEQRYAQIEQEVVENLDLLHWSENDNCYCDISIDPEDDEIREFVCHEG--YVSVLPFALKLIPKNSPKLEKVVALMSDPEKIFSDYGLLSLSRQDDYFGKDENYWRGPIWMNINYLCLDAMRYYY-------PEVILDVAGEAS--NAKKLYQSLKINL-----SNNIYKVWEEQGYCYENYSPIDGHGTGAEHFTGWTALVVNILGRFRSHHHHHH------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -343705 for 5184 contacts (-66.3/contact) +
2D Compatibility (PS) -68329 + (NN) -12922 + (LL) 4216
1D Compatibility (HY) -19200 + (ID) 5850
Total energy: -445790.0 ( -85.99 by residue)
QMean score : 0.269
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