Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYMKKLKFITLTLAIIITLPMLQSCLDDNDHQSRSLVISTINQISEDSKEFYFTLDNGKTMFPSNSQAWGGEKFE---NGQRAFVIFNELEQPVNGYDYNIQVRDITKVLTKEIVTMDDEENTEEKIGDDKINATYMWISKDKKYLTIEFQYYSTHSEDKKHFLNLVINNKEADSAAENEDNTDDEYINLEFRHNSERDSPDHLGEG-YVSFKLDKIEEQIEGKKGLNIRVRTLYDGIKNYKVQFP |
2BHV Chain:A ((166-376)) | ----NKLLRTITADKMIPAFLITPISSQIAGKVIAQVESDIF-----------AHMGKAVLIPKGSKVIGYYSNNNKMGEYRLDIVWSRIITP-----------------HGINIMLTNAYNGLVGELIERNFQRY----GVPLLLSTLTNGLLIGITSAF-------GDYLLMQLMRQSGMGINQVVNQILRDKSKIAPIVVIREGSRVFISPNT---DIFFPIPRENEVIAEFLK--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BHV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3920 for 1278 contacts (-3.1/contact) +
2D Compatibility (PS) -19526 + (NN) 2370 + (LL) 5032
1D Compatibility (HY) -3200 + (ID) 1100
Total energy: -20344.0 ( -15.92 by residue)
QMean score : 0.104
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