Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------------------------------------MMVMKRPSLRQFSWLLGGSLLLGALFWLWLAVQQQE-ATLAIRPVGQGIGMPDGFSVWHHLDANGIRFKSITPQKDGLLIKFDSTAQGAAAKEVLGRALPHGYIIALLEDDNSPTAWLSRLRDAPHRLG-
1XEW Chain:Y ((1012-1173))
VFMRTFEAISRNFSEIFAKLSPGGSARLILENPEDPFSGGLEIEAKPAGKDVKRIEAMSGGEKALTALAFVFAIQKFKPAPFYLFDEIDAHLDDANVKRVADLIKES--------SKESQFIVITLRDVMMANADKIIGVSMGVSKVVSLSLEKA--MKILEEIRK---KQGW
General information:
TITO was launched using:
RESULT:
Template:
1XEW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50677 for 685 contacts (-74.0/contact) +
2D Compatibility (PS) -12128 + (NN) -4432 + (LL) 436
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -70651.0 ( -103.14 by residue)
QMean score : 0.180
(partial model without unconserved sides chains):
PDB file :
Tito_1XEW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XEW-query.scw
PDB file :
Tito_Scwrl_1XEW.pdb
: