Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MKKRVIFLLTGLFIWTS---VLLAQNV-PEGVIGAFKEGNSQELNKYLGDKVDLIIQNK------STHADKRTAEGTMAAFFSNH----------KVGSFNVNHQGKRDESGFVIGILMTAN------GNFRVNC---FFRKVQNKYVIHQIRIDKTDE---------- |
| 1WQS Chain:A ((1-173)) | APPTLWSRVVRFGSGWGFWVSPTVFITTTHVIPTGVREFFGEPIESIAIHRAGEFTQFRFSRKVRPDLTGMVLEEGCPEGVVCSILIKRDSGELLPLAVRMGAIASMKIQGRLVHGQSGMLLTGANAKGMDLGTLPGDCGAPYVYKRNNDWVVCGVHAAATKSGNTVVCAVQA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WQS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42963 for 825 contacts (-52.1/contact) +
2D Compatibility (PS) -13885 + (NN) 106 + (LL) 0
1D Compatibility (HY) -4400 + (ID) 1350
Total energy: -62492.0 ( -75.75 by residue)
QMean score : 0.284
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