Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------------MKKNSLYIISSLFFAC----VLFVYATATN---FQNSTSARQVKTETYTNTVTNVPIDIRYNSDK--YFISGFASEVSVVLTGANRLSLASEMQESTRKFKVTADLTD-------------AGVGTIEVPLSIEDLPNGLTAVATPQKITVKIGK-KAQKDKVK--IVPEIDPSQIDSRVQIENVMVSDKEVSITS---DQETLDRIDK----------------IIAVLPTSERITGNYS-----GSVPLQAIDRNGVVLPAVITPFDTIMKVTTKPVA--------PSSSTSNSSTSSSSETS-----SSTKATSSKTN------------------------------------------------------------------------------------------------------------ |
| 1AMU Chain:A ((17-530)) | GTHEEEQYLFAVNNTKAEYPRDKTIHQLFEEQVSKRPNNVAIVCENEQLTYHELNVKANQLARIFIEKGIGKDTLVGIMMEKSIDLFIGILAVLKAGGAYVPIDIEYPKERIQYILDDSQARMLLTQKHLVHLIHNIQFNGQVEIFEEDTIKIREGTNLHVPSKSTDLAYVIYTSPKGTMLEHKGISNLKVFFENSLNVTEKDRIGQFASISFDASVWEMFMALLTGASLYIILKDTIND-------FVKFEQYINQKEITVITLPPTYVVHLDPERIL----------SIQTLITAGSATSPSLVNKWKEKVTYINAYGPTETTICATTWVATKETIGHSVPIGAPIQNTQIYIVDENLQLK-----SVGEAGELCIGGEGLARGYWKRPELTSQKFVDNPFVPGEKLYKTGDQARWLSDGNIEYLGRIDNQVKIRGHRVELEEVESILLKHMYISETAVSVHKDHQEQPYLCAYFVSEKHIPLEQLRQFSSEELPTYMIPSYFIQLDKMPLTSNGKIDRKQLPEPDLTF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AMU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5841 for 1335 contacts (4.4/contact) +
2D Compatibility (PS) -24955 + (NN) -2757 + (LL) 2244
1D Compatibility (HY) -2800 + (ID) 1200
Total energy: -23627.0 ( -17.70 by residue)
QMean score : 0.344
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