Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------MGPNAVELTTDQAWCLADVLGAGSYPWVLAITPPYSDHSQRSAFLAAQSAELTRMGV--VNSAGAVDPRVAQWITTVCR-----ATQWLDLRFVSGPGDLLRGMVARRSEETVVALRNAQLVTFTAMDIGHQHALVPVLTAGLSGRKPARF-DDFALPAAAGARADEQIRNGAPLAEVLEFLGVPPSARPLVESVFDGRRTYVEIVAGEHRDGHRVTTEV-GVSIIDTPHGRILVHPTKAF------DGEWISTFTPGSADAIAMAVERLTASLPSGSWFP---------------------------------------DQPLTRDFDEDAATHREPVLQRRTQKA- |
| 1GP6 Chain:A ((2-350)) | VAVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHG-IPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRD-------LSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVG-----LGLEPD---RLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKWVT--AKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRT--FAQHIEHKLFGKEQEEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GP6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53260 for 1820 contacts (-29.3/contact) +
2D Compatibility (PS) -30045 + (NN) -15780 + (LL) 1960
1D Compatibility (HY) -400 + (ID) 1550
Total energy: -99075.0 ( -54.44 by residue)
QMean score : 0.136
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